top of page
McDonnell Genome Institute
Washington University
Transcript
lnc-TPPP-2:3
Chromosome
chr5
Gene Name
lnc-TPPP-2
Start
599150
CPC Label
noncoding
End
612205
Cancer
BRCA-Luminal B
Strand
-
Peptide
LEIHSLAERPR
Modified Peptide
n[145]LEIHSLAERPR
Peptide Length
11
ORF Length
174
Open Reading Frame (ORF)
MLEIHSLAERPRLHSCGQWNSRHTHSHCHAQFTCAHAHSHSTLTVHTPHTHTYTGVRAHAHSRTHPPTHSLTPRFTPTHGPQSTGTCHTPTRGPPSHSKAFPHIPGRQEPSGQCRGMDEGQGGRWHEPPALHILLERKGGAGPPCPQLLGEAASGPGPAAPLLVSVPPLSIHKR
Conservation Score
0.335
PhyloCSF Frame 1
0
No. of Spectra
16
CPC Coding Probability
0.326323
PhyloCSF Frame 2
0
CNTI Index
noncoding
Max Probability
0.9996
PhyloCSF Frame 3
0
CNTI Score
-0.281816888
bottom of page