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McDonnell Genome Institute
Washington University
Transcript
lnc-LMF1-3:2
Chromosome
chr16
Gene Name
lnc-LMF1-3
Start
975760
CPC Label
coding
End
981590
Cancer
EOGC
Strand
-
Peptide
AGALKAPTPGPVAAAATEPRGLPGPVGR
Modified Peptide
n[145]AGALKAPTPGPVAAAATEPRGLPGPVGR
Peptide Length
28
ORF Length
366
Open Reading Frame (ORF)
LRRRGEGGVCRPGGDRGVGEGTLPPPRRTSNRGSGSPPKAAPRGGLGPAVPEGGSDPFNQRAGGEGAAPFRVRQPTRDTRVSELAARETRVTYRAGALKAPTPGPVAAAATEPRGLPGPVGRRSWSVTRKVQMQSRGSCCRFLPAHRTHLGPPPTAQDAPPTPCSGPAESWCPQRPPAPVRRPRGPCCFALGTTGARPGAEGARAFGGSIGLQAEEQGPCHLPGGRSHLCSQVRGSSGGETECASWEAPRIVGGELAASLACPLFPVPPSRLAPAPAWEDPHLRLQCLFPLEALPSARGPRILPWPSEHRLGRPRNSSVRPGMQAGRSGGLSGSSEGGGPVQTVPPSTPCPWESRHRPLGLTVPSG
Conservation Score
0.913
PhyloCSF Frame 1
-2.474
No. of Spectra
1
CPC Coding Probability
0.763785
PhyloCSF Frame 2
-3.611
CNTI Index
noncoding
Max Probability
0.0593
PhyloCSF Frame 3
-0.722
CNTI Score
-0.241563476
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