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McDonnell Genome Institute
Washington University
Transcript
lnc-C20orf203-2:1
Chromosome
chr20
Gene Name
lnc-C20orf203-2
Start
32573475
CPC Label
coding
End
32577016
Cancer
BRCA-HER2-enriched
Strand
-
Peptide
AAGLADGSRGEWGDGRAGGR
Modified Peptide
n[145]AAGLADGSRGEWGDGRAGGR
Peptide Length
20
ORF Length
253
Open Reading Frame (ORF)
LSDPPNPRAWRQGHGRTPGSEGSRGALALHPPLAHGALSPLVRAPHVSFLDLKAALPPGQTQPCGRRMPLLPLVHALPLRFQLQLQAWPGRAAGLADGSRGEWGDGRAGGRLGPSSHPRGCGSRSTSPLGHPGHGAPPLQMGKLRQSGGNSLKVPMSSRAECEPLVPKPRSFIYSLPRCPSCTAAAALMFNSWDCHCHEDVKRGLPGQQGLLTGQSHCRDIQKAVWPRTVLHLDPNSGNSCVVLGKWLACFDP
Conservation Score
0.888
PhyloCSF Frame 1
0
No. of Spectra
4
CPC Coding Probability
0.804013
PhyloCSF Frame 2
0
CNTI Index
noncoding
Max Probability
0.5496
PhyloCSF Frame 3
0
CNTI Score
-0.35110801
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